PR3: napari widget button for plate overview - #13
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Closes #10. Adds a "Generate plate overview" button to PhenixDataLoaderWidget that prompts for an output directory, calls generate_plate_overview() with defaults, and opens the result in the OS file viewer. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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Closes #10. Part of #7.
Summary
PhenixDataLoaderWidget(new "Plate Overview" collapsible section, near "Save Options")._set_controls_enabled).QFileDialog.getExistingDirectory()defaulting to the experiment directory, callsgenerate_plate_overview(experiment_path, output_dir)with the function's defaults, then opens the chosen directory in the host OS file viewer (macOSopen, Linuxxdg-open, Windowsexplorer).Test plan
QFileDialog+subprocess.run, assertsgenerate_plate_overviewis called with(experiment_path, chosen_dir)and that the OS-open command includes the chosen dirtest_set_controls_enabledupdated to cover the new button🤖 Generated with Claude Code